BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028B02SP1|AL428842
(835 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1260 1528 0.0
>3x_Contig1260
Length = 5981
Score = 1528 bits (755), Expect = 0.0
Identities = 802/835 (96%)
Strand = Plus / Plus
Query: 1 gtaaatacttcataamacacaatttcatcctccgatgagacactgttaagcgaatmacac 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 3765 gtaaatacttcataaaacacaatttcatcctccgatgagacactgttaagcgaataacac 3824
Query: 61 ccatctagtaccataattcgttctaataacccggttagaaagtcttcagcacacatgttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3825 ccatctagtaccataattcgttctaataacccggttagaaagtcttcagcacacatgttg 3884
Query: 121 catctcamactctcatctcatctcatcgctcgttcaagatttggagagamaggcttccaa 180
||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 3885 catctcaaactctcatctcatctcatcgctcgttcaagatttggagagaaaggcttccaa 3944
Query: 181 atctgamammcattcgtttagagtataacmggtgatggmtctctacaccaaaaggmaatm 240
|||||| | ||||||||||||||||| |||||||| |||||||||||||||| |||
Sbjct: 3945 atctgaaaaaaattcgtttagagtataaaaggtgatggatctctacaccaaaaggaaata 4004
Query: 241 matgccaacttgamacgttccaaattagtagtgactgagcmacacgcaggcgccgttata 300
|||| ||||||| |||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 4005 aatgcaaacttgaaacgttccaaattagtagtgactgagcaacacgcaggcgccgttata 4064
Query: 301 ctctattgtmttatcatmcmttcmcctaacgatgtctgataacgtatacmttgttgctgc 360
||||||||| |||| || || ||||||||||||||||||||||||| ||||||||||
Sbjct: 4065 ctctattgtattataataaattaacctaacgatgtctgataacgtatacattgttgctgc 4124
Query: 361 tgccagamctccaattggttctttccaaggttctttgtcctctmagamctgtgtcgatct 420
||| ||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 4125 tgcaagaactccaattggttctttccaaggttctttgtcctctaagaactgtgtcgatct 4184
Query: 421 aggttctgctgctgtcaaaggtgctttagctcaagttccagagatcgatccaagcactgt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4185 aggttctgctgctgtcaaaggtgctttagctcaagttccagagatcgatccaagcactgt 4244
Query: 481 cgaggaaatcatcttcggtaacgttatatctgctaatgttggtcaagcaccagctagaca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4245 cgaggaaatcatcttcggtaacgttatatctgctaatgttggtcaagcaccagctagaca 4304
Query: 541 agtggcattagctgctgggttgggaaaacacattgtcgccagtmctgttaacaaggtttg 600
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 4305 agtggcattagctgctgggttgggaaaacacattgtcgccagtactgttaacaaggtttg 4364
Query: 601 tgcttctggtatgamagctatcatcttgggtgctcaggccattaagaccggttctgccga 660
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4365 tgcttctggtatgaaagctatcatcttgggtgctcaggccattaagaccggttctgccga 4424
Query: 661 tattattgttgctggkggtgctgaatcaatgtccaatgccccatactacttgtcgtctca 720
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4425 tattattgttgctggtggtgctgaatcaatgtccaatgccccatactacttgtcgtctca 4484
Query: 721 ccgtagtggtgctagatttggtgaaagcaaagtcattgatggtattcaaagagatggttt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4485 ccgtagtggtgctagatttggtgaaagcaaagtcattgatggtattcaaagagatggttt 4544
Query: 781 gaacgatgcttacgacggtcaggccatgggkgttcatgctgagaaatgtgccagt 835
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 4545 gaacgatgcttacgacggtcaggccatgggtgttcatgctgagaaatgtgccagt 4599
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.715 1.33
Gapped
Lambda K H
1.40 0.715 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4821
Number of Sequences: 1807
Number of extensions: 4821
Number of successful extensions: 396
Number of sequences better than 1.0e-20: 1
length of query: 835
length of database: 10,358,551
effective HSP length: 16
effective length of query: 819
effective length of database: 10,329,639
effective search space: 8459974341
effective search space used: 8459974341
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.3 bits)
S1: 12 (24.8 bits)
S2: 49 (99.7 bits)